GlycoEnzDB
The Comprehensive Glyco-enzyme Database
GlycoEnzDB
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Instructions/Reference
PGAP4



General Information
Gene Symbol:   
PGAP4
Protein name:   
Post-GPI attachment to proteins factor 4
Enzyme Class:   
CAZy Family:   
E.C. No:   
Reaction (SNFG):   

Man(a1-2)[anchor-protein]6EtNP]Man(a1-2)Man(a1-6)[2EtNP]Man(a1-4)GlcN(a1-6)(ancyl)PI Man(a1-2)[anchor-protein]6EtNP]Man(a1-2)Man(a1-6)[2EtNP][GalNAc(b1-4)]Man(a1-4)GlcN(a1-6)(ancyl)PI
Reaction (IUBMB):   
No specified reaction.

About
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Related Pathway
KEGG ORTHOLOGY:   
KEGG Pathway:   
Reactome:   

Related Database
Organism:   
Homo sapiens
Uniprot:   
NCBI GeneID:   
GlyMap GeneID:   
DNA_RefSeq:   
Protein_RefSeq:   
BRENDA:   
OMIM number:   
-
GeneCards database:   

Enzyme Specificity
Glycan Type:  
     GPI
Compartment:  
     Cis, Medial, Trans, TGN
Substrate:  
     Man(a1-2)[anchor-protein]6EtNP]Man(a1-2)Man(a1-6)[2EtNP]Man(a1-4)GlcN(a1-6)(ancyl)PI(-CHAR)
Product:  
     Man(a1-2)[anchor-protein]6EtNP]Man(a1-2)Man(a1-6)[2EtNP][GalNAc(b1-4)]Man(a1-4)GlcN(a1-6)(ancyl)PI(-CHAR)

Simulation Parameters
Mechaelis-Menten parameters (suggested)
Vm:       (pmol/cell • hr)       Km:       (pM)
Relative conc of enzymes in compartment.(sum will be normalized to 1)
ER Cis- Medial- Trans- TGN











Expression Data {ref. 5} Source from NCBI gene database
adrenal appendix bone marrow brain colon duodenum endometrium esophagus fat gall bladder heart kidney liver lung lymph node ovary pancreas placenta prostate salivary gland skin small intestine spleen stomach testis thyroid urinary bladder 30 20 10 0 RPKM
Expression data are collected from NCBI gene database

Expression Data in Cells
No expression data available.
Transcription factor {ref. 10}
No high degree of confidence data