GlycoEnzDB
The Comprehensive Glyco-enzyme Database
GlycoEnzDB
Create glycosylation pathway
Custom database generation
Instructions/Reference
B3GLCT



General Information
Gene Symbol:   
B3GLCT
Protein name:   
Beta-1,3-glucosyltransferase
Enzyme Class:   
Glycosyltransferase
CAZy Family:   
E.C. No:   
Reaction (SNFG):   
+
+ UDP
Reaction (IUBMB):   
No specified reaction.

About

* During O-Fuc modification of TSR1 (thrombospondin type 1) repeat, the first step involves the transfer of fuc by Pofut2 to Ser/Thr in this domain. The absence of Pofut2 in mice results in early embryonic lethality with defects in gastrulation. 
* The next step involves the transfers glucose to O-Fuc by a gene encoding the β3-glucosyltransferase, B3GLCT or B3GALTL. Mutations in B3GLCT in humans results in a multifaceted severe developmental disorder known as Peters-plus syndrome.
* Besides O-fuc, and C-mannosylation also occur on TSR1/thrombospondin-1 domains.


Related Pathway
KEGG ORTHOLOGY:   
KEGG Pathway:   
Reactome:   

Related Database
Organism:   
Homo sapiens
Uniprot:   
NCBI GeneID:   
GlyMap GeneID:   
DNA_RefSeq:   
Protein_RefSeq:   
BRENDA:   
OMIM number:   
GeneCards database:   

Enzyme Specificity
Glycan Type:  
     O_linked (not mucin type)
Compartment:  
     Cis, Medial, Trans, TGN
Substrate:  
     Fuc(a1-?)Ser|Thr
Product:  
     Glc(b1-3)Fuc(a1-?)Ser|Thr

Simulation Parameters
Mechaelis-Menten parameters (suggested)
Vm:       (pmol/cell • hr)       Km:       (pM)
Relative conc of enzymes in compartment.(sum will be normalized to 1)
ER Cis- Medial- Trans- TGN











Expression Data {ref. 5} Source from NCBI gene database
adrenal appendix bone marrow brain colon duodenum endometrium esophagus fat gall bladder heart kidney liver lung lymph node ovary pancreas placenta prostate salivary gland skin small intestine spleen stomach testis thyroid urinary bladder 8 6 4 2 0 RPKM
Expression data are collected from NCBI gene database

Expression Data in Cells
No expression data available.
Transcription factor {ref. 10}
No high degree of confidence data
miRNA-GlycoEnzyme Interactome {ref. 9}
B3GLCT/hsa-miR-6887-3p
miRNA Target Site Type Pos. Context Score Frac. Wt. Context Frac. Conserved Quality
5'...AGACUGGGAAUGG GGAGGGGA ...
3'   GAUCCUCCUUUCA CCUCCCC U
8mer 1903-1910 -0.302 91.0 -0.135 77.0 noncon