Description: The GlycoEnzDB is a manually curated glycoEnzyme database, primarily focused on humans. It covers 390 enzymes across 28 pathway maps. Facilities are also available to create custom glycosylation reaction pathways using experimental data in SBML format and for pathway simulation
Contacts: Sriram Neelamegham (neel@buffalo.edu), Yusen Zhou (yusenzho@buffalo.edu) or Ted Groth (tgroth@buffalo.edu).
Glycogene class |
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Pathway figs |
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Glycosylation |
Sugar Nucleotide |
Glucuronidation |
Glycan Degradation |
Pathway Map |
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+ |
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→ |
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+ | UDP |
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+ |
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→ |
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+ | UDP |
• Activity is similar to B4GalNT1, but substrate specificity is distinct as it forms the Sda or Cad antigen.
• B4GalNT2 is suppressed during gastric cancer.
ER | Cis- | Medial- | Trans- | TGN |
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miRNA Name | Pos. | Context Score | Frac. | Wt. Context | Frac. | Conserved | Quality |
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hsa-miR-509-3p | 145-152 | -0.573 | 99.0 | -0.573 | 99.0 | noncon | |
hsa-miR-3162-3p | 109-116 | -0.564 | 99.0 | -0.564 | 99.0 | noncon | |
hsa-miR-874-3p | 190-197 | -0.562 | 99.0 | -0.562 | 99.0 | noncon | |
hsa-miR-150-3p | 90-97 | -0.504 | 98.0 | -0.504 | 99.0 | noncon | |
hsa-let-7c-3p | 226-233 | -0.459 | 99.0 | -0.459 | 99.0 | noncon | |
hsa-miR-4433a-3p | 71-78 | -0.455 | 99.0 | -0.455 | 99.0 | noncon | |
hsa-miR-6132 | 235-241 | -0.436 | 98.0 | -0.436 | 98.0 | noncon | |
hsa-miR-5190 | 181-188 | -0.427 | 99.0 | -0.427 | 99.0 | noncon | |
hsa-miR-6836-5p | 235-241 | -0.421 | 98.0 | -0.421 | 98.0 | noncon | |
hsa-miR-1289 | 69-75 | -0.417 | 97.0 | -0.417 | 98.0 | noncon | |
hsa-miR-1207-5p | 236-242 | -0.416 | 98.0 | -0.416 | 99.0 | noncon | |
hsa-miR-4755-5p | 118-125 | -0.411 | 99.0 | -0.411 | 99.0 | noncon | |
hsa-miR-5006-3p | 118-125 | -0.411 | 99.0 | -0.411 | 99.0 | noncon | |
hsa-miR-4763-3p | 236-242 | -0.406 | 98.0 | -0.406 | 98.0 | noncon | |
hsa-miR-204-5p | 117-124 | -0.404 | 98.0 | -0.404 | 99.0 | noncon | |
hsa-miR-211-5p | 117-124 | -0.396 | 98.0 | -0.396 | 98.0 | noncon | |
hsa-miR-6751-3p | 127-133 | -0.395 | 98.0 | -0.395 | 99.0 | noncon | |
hsa-miR-1199-5p | 127-133 | -0.391 | 98.0 | -0.391 | 99.0 | noncon | |
hsa-miR-136-5p | 196-203 | -0.354 | 98.0 | -0.354 | 98.0 | noncon | |
hsa-miR-6808-5p | 237-243 | -0.346 | 99.0 | -0.346 | 99.0 | noncon | |
hsa-miR-6893-5p | 237-243 | -0.346 | 99.0 | -0.346 | 99.0 | noncon | |
hsa-miR-1256 | 231-237 | -0.342 | 97.0 | -0.342 | 98.0 | noncon | |
hsa-miR-6832-3p | 116-123 | -0.338 | 98.0 | -0.338 | 98.0 | noncon | |
hsa-miR-940 | 237-243 | -0.328 | 99.0 | -0.328 | 99.0 | noncon | |
hsa-miR-4446-5p | 112-119 | -0.318 | 98.0 | -0.318 | 98.0 | noncon | |
hsa-miR-7973 | 161-167 | -0.317 | 94.0 | -0.317 | 96.0 | noncon | |
hsa-miR-4317 | 193-199 | -0.301 | 95.0 | -0.301 | 96.0 | noncon | |
hsa-miR-3977 | 248-254 | -0.291 | 98.0 | -0.291 | 98.0 | noncon | |
hsa-miR-3157-3p | 191-197 | -0.285 | 97.0 | -0.285 | 98.0 | noncon | |
hsa-miR-6754-3p | 155-161 | -0.284 | 96.0 | -0.284 | 97.0 | noncon | |
hsa-miR-4761-3p | 233-239 | -0.278 | 98.0 | -0.278 | 98.0 | noncon | |
hsa-miR-134-5p | 179-185 | -0.273 | 94.0 | -0.273 | 96.0 | noncon | |
hsa-miR-105-5p | 252-258 | -0.273 | 98.0 | -0.273 | 99.0 | noncon | |
hsa-miR-7853-5p | 252-258 | -0.273 | 98.0 | -0.273 | 99.0 | noncon | |
hsa-miR-4446-5p | 119-125 | -0.269 | 97.0 | -0.269 | 97.0 | noncon | |
hsa-miR-374c-5p | 205-212 | -0.268 | 96.0 | -0.268 | 97.0 | noncon | |
hsa-miR-1226-3p | 102-108 | -0.268 | 95.0 | -0.268 | 97.0 | noncon | |
hsa-miR-3194-5p | 28-34 | -0.266 | 94.0 | -0.266 | 95.0 | noncon | |
hsa-miR-412-3p | 155-161 | -0.263 | 95.0 | -0.263 | 97.0 | noncon | |
hsa-miR-1263 | 143-149 | -0.263 | 90.0 | -0.263 | 93.0 | noncon | |
hsa-miR-655-3p | 205-212 | -0.26 | 96.0 | -0.26 | 97.0 | noncon | |
hsa-miR-802 | 133-139 | -0.254 | 96.0 | -0.254 | 97.0 | noncon | |
hsa-miR-4768-3p | 72-78 | -0.254 | 98.0 | -0.254 | 98.0 | noncon | |
hsa-miR-3118 | 179-185 | -0.251 | 92.0 | -0.251 | 94.0 | noncon |